RSRE - RNA Structural Robustness Evaluator
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1454 sequences analyzed since June 6, 2006.
Step 1 : Entering Your Email Address
Email address (requried)
Step 2 : Inputting Sequence
Sequence name
Raw sequence
UACACUGUGGAUCCGGUGAGGUAGUAGGUUGUAUAGUUUGGAAUAUUACCACCGGUGAACUAUGCAAUUUUCUACCUUACCGGAGACAGAACUCUUCGA
Uploading file
Step 3: Specifying Parameters
Suboptimal structures
Not Considered
Boltzmann Weighted Distance
Number of control sequences
Randomization Method
Random
Zero-order Markov
First-order Markov
Mono-nucleotide
Di-nucleotide
Step 4:Randomization Method
Environmental robustness
Thermodynamic stability (Minimum free energy)
Genetic Robustness
String edit distance
Full
HIT
Coarse Grained
Weighted Coarse Grained
All
Tree edit distance
Full
HIT
Coarse Grained
Weighted Coarse Grained
All
Base pair distance
Base pair distance
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RSRE - RNA Structural Robustness Evaluator
Copyright © 2007 Beijing Institute of Radiation Medicine
Maintained by Wenjie Shu